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PXD001010-1

PXD001010 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleSWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress
DescriptionSWATH analysis of Yeast Proteome over time in response to Osmotic Stress. We sampled cell cultures in biological triplicates at six time points following the application of osmotic stress and acquired single injection DIA datasets on a high-resolution 5600 tripleTOF instrument operated in SWATH mode. Proteins were quantified by the targeted extraction and signal integration from the SWATH-MS datasets of peak groups representing proteotypic peptides for specific yeast proteins.
HostingRepositoryPRIDE
AnnounceDate2015-01-22
AnnouncementXMLSubmission_2015-01-22_03:23:45.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterLucia Espona Pernas
SpeciesList scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationListmethionine oxidation with neutral loss of 64 Da; S-carboxamidomethyl-L-cysteine
InstrumentTSQ Quantum; TripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02014-05-27 05:26:12ID requested
12015-01-22 03:23:46announced
22015-01-23 00:31:10announcedUpdated project metadata.
32017-06-20 05:42:44announcedUpdated project metadata.
42017-10-24 00:14:19announcedUpdated project metadata.
Publication List
Selevsek N, Chang CY, Gillet LC, Navarro P, Bernhardt OM, Reiter L, Cheng LY, Vitek O, Aebersold R, Reproducible and consistent quantification of the Saccharomyces cerevisiae proteome by SWATH-mass spectrometry. Mol Cell Proteomics, 14(3):739-49(2015) [pubmed]
Keyword List
submitter keyword: yeast, SWATH-MS, 5600, osmotic stress
Contact List
Ruedi Aebersold
contact affiliationInstitute of Molecular Systems Biology, ETH Zurich
contact emailaebersold@imsb.biol.ethz.ch
lab head
Lucia Espona Pernas
contact affiliationInstitute of Molecular Systems Biology
contact emailespona@imsb.biol.ethz.ch
dataset submitter
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Dataset FTP location
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PRIDE project URI
Repository Record List
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