PXD062734-1

PXD062734 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic analysis of mitoUFD binding partners
Description	This project is to identify the binding partners of the OMM anchored ubiquitin-fusion degradation substrate (mitoUFD) in comparison with the mitoGFP control that lacks the ubiquitin fusion as the degradation signal. In addition, we performed RNAi knockdown for bcat-1, lars-1 and gcn-2 compared to the L4440 RNAi control to identify the changes of mitoUFD binding partners upon disruption of leucine catabolism or sensing.
HostingRepository	PRIDE
AnnounceDate	2025-11-05
AnnouncementXML	Submission_2025-11-05_03:06:11.542.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Prerana Wagle
SpeciesList	scientific name: Caenorhabditis elegans; NCBI TaxID: NEWT:6239;
ModificationList	monohydroxylated residue
Instrument	Orbitrap Exploris 480; Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-04-08 07:14:39	ID requested
⏵ 1	2025-11-05 03:06:12	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Mitochondria
Outer mitochondrial membrane
MitoUFD
Pulldown

submitter keyword: Mitochondria

Outer mitochondrial membrane

MitoUFD

Pulldown

Contact List

Thorsten Hoppe
contact affiliation	Institute for Genetics and CECAD Research Center, University of Cologne, Cologne, Germany
contact email	thorsten.hoppe@uni-koeln.de
lab head
Prerana Wagle
contact affiliation	CECAD Research Center
contact email	proteomics-facility@uni-koeln.de
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD062734
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD062734

PRIDE project URI

Repository Record List

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