PXD051890-2

PXD051890 is an original dataset announced via ProteomeXchange.

Title	K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors
Description	Ubiquitin-interactor co-pulldown coupled with mass spectrometry used to elucidate K48- and K63-linked interactomes including those of Ub chains of varying length (Ub-Ub3) and heterotypic branched Ub chains. Ubiquitin-interactors were enriched from human HeLa and yeast s. cerevisiae cell lysate with either chloroacetamide (CAA) or N-ethylmaleimide (NEM) as DUB inhibitors.
HostingRepository	PRIDE
AnnounceDate	2024-05-20
AnnouncementXML	Submission_2024-05-20_08:18:52.211.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Oliver Popp
SpeciesList	scientific name: Candida albicans; NCBI TaxID: NCBITaxon_5476;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2024-04-30 05:11:55	ID requested
1	2024-05-15 06:28:09	announced
⏵ 2	2024-05-20 08:18:52	announced	2024-05-20: Updated project metadata.

10.26508/LSA.202402740;

submitter keyword: Branched Ubiquitin Chains / Interactor / Protein-protein interaction / Proteomics / Proteostasis / Ubiquitin

Thomas Sommer
contact affiliation	Max-Delbrück-Center for Molecular Medicine (MDC) in the Helmholtz Association
contact email	tsommer@mdc-berlin.de
lab head
Oliver Popp
contact affiliation	MDC Berlin
contact email	oliver.popp@mdc-berlin.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/05/PXD051890

PRIDE project URI

• PRIDE
  1. PXD051890
     1. Label: PRIDE project
     2. Name: K48- and K63-linked ubiquitin chain interactome reveals branch- and length-specific ubiquitin interactors