PXD037627 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Immunopeptidomics of a brain tumour cell line to identify HLA presented Zika peptides |
| Description | We present data of a brain tumour cell line (USP7) infected with Zika virus (Strain: BeH819966, GenBank: KU365779.1) to identify CD8 T cell epitopes eluted from the cell surface using mass spectrometry (immunopeptidomics) of presented HLA bound Zika peptides. |
| HostingRepository | PRIDE |
| AnnounceDate | 2025-11-10 |
| AnnouncementXML | Submission_2025-11-09_17:29:03.283.xml |
| DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD037627 |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Alistair Bailey |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606; |
| ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | Orbitrap Fusion |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2022-10-20 13:37:39 | ID requested | |
| ⏵ 1 | 2025-11-09 17:29:04 | announced | |
Publication List
| 10.1371/journal.pone.0335726; |
| Sherwood M, Nicholas B, Bailey A, Mitsugi TG, Kaid C, Okamoto OK, Skipp P, Ewing RM, Identification of natural Zika virus peptides presented on the surface of paediatric brain tumour cells by HLA class I. PLoS One, 20(10):e0335726(2025) [pubmed] |
| 10.6019/PXD037627; |
Keyword List
| submitter keyword: HLA, brain, Zika,peptidome |
Contact List
| Paul J Skipp |
|---|
| contact affiliation | Centre for Proteomic Research, B85, Life Sciences Building, University of Southampton, University Road Highfield, Southampton, Hants. SO17 1BJ United Kingdom |
| contact email | pjss@soton.ac.uk |
| lab head | |
| Alistair Bailey |
|---|
| contact affiliation | University of Southampton |
| contact email | ab604@soton.ac.uk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD037627 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD037627
- Label: PRIDE project
- Name: Immunopeptidomics of a brain tumour cell line to identify HLA presented Zika peptides
