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PXD026517-1

PXD026517 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pupylation sites on protein Sox2
Description	As a test for the effectiveness of SPIDER with RNA-protein pairs, We used Sox2 and specific biotin-DNA and biotin-RNA to validate the efficiency of SPIDER capturing protein-nucleic acid interaction. Pupylation sites on Sox2 after SPIDER assay was identified by LC-MS/MS analysis, by searching for an additional mass of ~243 Da, which represents the three C-terminal residues of Pup, i. e., GGE, that covalently binds to adjacent lysine by pupylation. ）
HostingRepository	iProX
AnnounceDate	2021-06-04
AnnouncementXML	Submission_2021-06-06_22:21:23.354.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xuening Wang
SpeciesList	scientific name: Homo sapiens; NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-06-06 22:21:00	ID requested
⏵ 1	2021-06-06 22:21:23	announced
2	2023-05-06 00:12:47	announced	2023-05-06: Update publication information.

Publication List

Dataset with its publication pending

Keyword List

submitter keyword: Homo sapiens, Sox2, pupylation

Contact List

Shengce Tao
contact affiliation	Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong Universit
contact email	taosc@sjtu.edu.cn
lab head
Xuening Wang
contact affiliation	Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong Universit
contact email	wxnyoyo@sjtu.edu.cn
dataset submitter

Full Dataset Link List

iProX dataset URI