PXD022377-1

PXD022377 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Multi-omics driven metabolic network reconstruction and analysis of lignocellulosic carbon utilization in Rhodosporidium toruloides
Description	Global proteomics datasets to study lignocellulosic carbon utilization in Rhodosporidium Toruloides
HostingRepository	PRIDE
AnnounceDate	2021-09-09
AnnouncementXML	Submission_2021-09-09_13:27:48.946.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD022377
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Rhodotorula toruloides; NCBI TaxID: 5286;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-11-05 02:02:44	ID requested
⏵ 1	2021-09-09 13:27:49	announced

Publication List

Kim J, Coradetti ST, Kim YM, Gao Y, Yaegashi J, Zucker JD, Munoz N, Zink EM, Burnum-Johnson KE, Baker SE, Simmons BA, Skerker JM, Gladden JM, Magnuson JK, . Front Bioeng Biotechnol, 8():612832(2020) [pubmed]

Kim J, Coradetti ST, Kim YM, Gao Y, Yaegashi J, Zucker JD, Munoz N, Zink EM, Burnum-Johnson KE, Baker SE, Simmons BA, Skerker JM, Gladden JM, Magnuson JK, . Front Bioeng Biotechnol, 8():612832(2020) [pubmed]

Keyword List

submitter keyword: Rhodosporidium toruloides, multi-omics, metabolic networks, genome-scale models, lignocellulosic biomass

submitter keyword: Rhodosporidium toruloides, multi-omics, metabolic networks, genome-scale models, lignocellulosic biomass

Contact List

Jon K Magnuson
contact affiliation	Pacific Northwest National Laboratory, USA
contact email	Jon.Magnuson@pnnl.gov
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022377
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD022377

PRIDE project URI

Repository Record List

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