PXD015702-1

PXD015702 is an original dataset announced via ProteomeXchange.

Title	CRISPR-Assisted Detection of RNA-Protein Interactions in Living Cells
Description	We develop a CRISPR-Assisted RNA-Protein Interaction Detection method (CARPID), which leverages CRISPR/CasRx-based RNA targeting and proximity labeling to identify binding proteins of specific lncRNA in the native cellular context.
HostingRepository	iProX
AnnounceDate	2020-05-20
AnnouncementXML	Submission_2020-06-23_05:18:25.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Liang Zhang
SpeciesList	scientific name: Homo sapiens; NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2019-10-04 05:38:55	ID requested
⏵ 1	2020-06-23 05:18:26	announced
2	2020-06-23 05:22:24	announced	2020-06-23: Update publication information.

Yi W, Li J, Zhu X, Wang X, Fan L, Sun W, Liao L, Zhang J, Li X, Ye J, Chen F, Taipale J, Chan KM, Zhang L, Yan J, CRISPR-assisted detection of RNA-protein interactions in living cells. Nat Methods, 17(7):685-688(2020) [pubmed]

submitter keyword: CRISPR/CasRx, lncRNAs , biotin ligase, Mass spectrometry

Liang Zhang
contact affiliation	City university of Hong Kong
contact email	liangzhang.28@cityu.edu.hk
lab head
Liang Zhang
contact affiliation	City university of Hong Kong
contact email	liangzhang.28@cityu.edu.hk
dataset submitter

iProX dataset URI