PXD012735-2
PXD012735 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Zebrafish, LC-MS/MS - Profiling of Histidine Phosphoproteome in Danio rerio by TiO2 Enrichment |
| Description | Histidine phosphorylation is a reversible post-translational modification that is known to regulate signal transduction in prokaryotes. In an effort to help elucidate the heretofore hidden vertebrate phosphoproteome, this report presents a global phosphorylation analysis of Danio rerio (zebrafish) larvae. Phosphopeptide enrichment was performed using a TiO2 affinity technique. A total of 68 unique phosphohistidine sites were detected on 63 proteins among 1076 unique phosphosites on 708 proteins. This report provides the first phosphohistidine dataset obtained from zebrafish. |
| HostingRepository | PRIDE |
| AnnounceDate | 2024-10-22 |
| AnnouncementXML | Submission_2024-10-22_04:53:07.721.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Yan Gao |
| SpeciesList | scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955; |
| ModificationList | phosphorylated residue |
| Instrument | LTQ Orbitrap Velos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2019-02-15 08:03:02 | ID requested | |
| 1 | 2019-03-21 04:26:35 | announced | |
| ⏵ 2 | 2024-10-22 04:53:08 | announced | 2024-10-22: Updated project metadata. |
Publication List
| 10.1002/pmic.201800471; |
| Gao Y, Lee H, Kwon OK, Cheng Z, Tan M, Kim KT, Lee S, Enrichment. Proteomics, 19(9):e1800471(2019) [pubmed] |
Keyword List
| curator keyword: Biological |
| submitter keyword: LC-MS/MS,embryo,zebrafish |
Contact List
| Sangkyu Lee | |
|---|---|
| contact affiliation | Lab of Toxicology,College of Pharmacy, Kyungpook National University, Daegu, Republic of Korea. |
| contact email | pharm239@gmail.com |
| lab head | |
| Yan Gao | |
| contact affiliation | Kyungpook National University |
| contact email | gaoyan0723@hotmail.com |
| dataset submitter | |
Full Dataset Link List
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD012735 |
| PRIDE project URI |
Repository Record List
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