PXD012735-1

PXD012735 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Zebrafish, LC-MS/MS
Description	Histidine phosphorylation is a reversible post-translational modification that is known to regulate signal transduction in prokaryotes. In an effort to help elucidate the heretofore hidden vertebrate phosphoproteome, this report presents a global phosphorylation analysis of Danio rerio (zebrafish) larvae. Phosphopeptide enrichment was performed using a TiO2 affinity technique. A total of 68 unique phosphohistidine sites were detected on 63 proteins among 1076 unique phosphosites on 708 proteins. This report provides the first phosphohistidine dataset obtained from zebrafish.
HostingRepository	PRIDE
AnnounceDate	2019-03-21
AnnouncementXML	Submission_2019-03-21_04:26:34.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yan Gao
SpeciesList	scientific name: Danio rerio (Zebrafish) (Brachydanio rerio); NCBI TaxID: 7955;
ModificationList	phosphorylated residue
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2019-02-15 08:03:02	ID requested
⏵ 1	2019-03-21 04:26:35	announced
2	2024-10-22 04:53:08	announced	2024-10-22: Updated project metadata.

Publication List

Gao Y, Lee H, Kwon OK, Cheng Z, Tan M, Kim KT, Lee S, Enrichment. Proteomics, 19(9):e1800471(2019) [pubmed]

Gao Y, Lee H, Kwon OK, Cheng Z, Tan M, Kim KT, Lee S, Enrichment. Proteomics, 19(9):e1800471(2019) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: zebrafish,embryo,LC-MS/MS

curator keyword: Biological

submitter keyword: zebrafish,embryo,LC-MS/MS

Contact List

Sangkyu Lee
contact affiliation	Lab of Toxicology,College of Pharmacy, Kyungpook National University, Daegu, Republic of Korea.
contact email	pharm239@gmail.com
lab head
Yan Gao
contact affiliation	Kyungpook National University
contact email	gaoyan0723@hotmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD012735
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/03/PXD012735

PRIDE project URI

Repository Record List

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