PXD010681-3

PXD010681 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Shotgun proteomics of Mn (II)-oxidizing Serratia marcescens
Description	In order to gain insight into how bacteria respond to manganese (II) and relate to oxidation, the shotgun proteomics approach was applied to a potential Mn (II) oxidizing Serratia marcescens strain cultivated in the absence and presence of Mn (II). The LG1 strain, which grew equally well in these two conditions, presented a set of proteins related to the cellular processes vital to its survival and proteins that ensured its good adaptation and tolerance to Mn (II). The multicopper oxidase CueO was identified, indicating its probable participation in the Mn (II) bio-oxidation, but its expression was not modulated by the presence of Mn (II).Through these findings, we reiterate the ability of LG1 to be applied successfully in the bioremediation of Mn (II) environments and the efficiency of the shotgun approach in obtaining the first total shotgun proteome of this specie.
HostingRepository	jPOST
AnnounceDate	2018-08-04
AnnouncementXML	Submission_2018-09-19_01:13:50.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	France Anne Dias Ruas
SpeciesList	scientific name: Serratia marcescens; NCBI TaxID: 615;
ModificationList	L-methionine sulfoxide; S-carboxamidomethyl-L-cysteine
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-03 18:03:34	ID requested
1	2018-08-03 18:03:38	announced
2	2018-08-10 00:09:08	announced	Updated ModificationList.
⏵ 3	2018-09-19 01:13:51	announced	Updated CV and FTP location.
4	2021-02-04 17:25:46	announced	2021-02-04: Updated FTP location.
5	2022-09-18 03:00:26	announced	2022-09-18: Updated FTP location.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Mn (II)-modulated proteins expression, Multicopper oxidase, Serratia marcescens proteome

submitter keyword: Mn (II)-modulated proteins expression, Multicopper oxidase, Serratia marcescens proteome

Contact List

Pollyana Santos Queiroz
lab head
France Anne Dias Ruas
contact affiliation	Universidade Federal de Ouro preto
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://jpost.pharm.kyoto-u.ac.jp/repository/JPST000470

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://jpost.pharm.kyoto-u.ac.jp/repository/JPST000470