PXD010681-1
PXD010681 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Shotgun proteomics of Mn (II)-oxidizing Serratia marcescens |
| Description | In order to gain insight into how bacteria respond to manganese (II) and relate to oxidation, the shotgun proteomics approach was applied to a potential Mn (II) oxidizing Serratia marcescens strain cultivated in the absence and presence of Mn (II). The LG1 strain, which grew equally well in these two conditions, presented a set of proteins related to the cellular processes vital to its survival and proteins that ensured its good adaptation and tolerance to Mn (II). The multicopper oxidase CueO was identified, indicating its probable participation in the Mn (II) bio-oxidation, but its expression was not modulated by the presence of Mn (II).Through these findings, we reiterate the ability of LG1 to be applied successfully in the bioremediation of Mn (II) environments and the efficiency of the shotgun approach in obtaining the first total shotgun proteome of this specie. |
| HostingRepository | jPOST |
| AnnounceDate | 2018-08-04 |
| AnnouncementXML | Submission_2018-08-03_18:03:37.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | France Anne Dias Ruas |
| SpeciesList | scientific name: Serratia marcescens; NCBI TaxID: 615; |
| ModificationList | (2S,3R)-3-hydroxyaspartic acid; iodoacetamide derivatized residue |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2018-08-03 18:03:34 | ID requested | |
| ⏵ 1 | 2018-08-03 18:03:38 | announced | |
| 2 | 2018-08-10 00:09:08 | announced | Updated ModificationList. |
| 3 | 2018-09-19 01:13:51 | announced | Updated CV and FTP location. |
| 4 | 2021-02-04 17:25:46 | announced | 2021-02-04: Updated FTP location. |
| 5 | 2022-09-18 03:00:26 | announced | 2022-09-18: Updated FTP location. |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: Mn (II)-modulated proteins expression, Multicopper oxidase, Serratia marcescens proteome |
Contact List
| Pollyana Santos Queiroz | |
|---|---|
| lab head | |
| France Anne Dias Ruas | |
| contact affiliation | Universidade Federal de Ouro preto |
| dataset submitter | |
Full Dataset Link List
| jPOST dataset URI |
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