PXD010643 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Characterization of degradative pathway of diclofenac in Raoultella sp. KDF8 resolved by comparative proteomics and metabolomics study |
Description | The widespread appearance of diclofenac as an emerging contaminant in the environment and its potential impact on living organisms is a matter of concern. Our current work uses proteomics and metabolomics to gain a better understanding of diclofenac biodegradation by the bacterial strain Raoultella sp. KDF8. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_07:02:27.016.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Karel Harant |
SpeciesList | scientific name: Raoultella sp.; NCBI TaxID: 1873496; |
ModificationList | No PTMs are included in the dataset |
Instrument | LTQ Orbitrap |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2018-08-01 03:48:20 | ID requested | |
1 | 2019-05-06 09:12:37 | announced | |
2 | 2019-12-13 04:02:56 | announced | 2019-12-13: Updated publication reference for DOI(s): 10.1016/j.ibiod.2018.11.013. |
⏵ 3 | 2023-11-14 07:02:27 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Biological |
submitter keyword: Degradation, proteomics, diclofenac, Raoultella; |
Contact List
Jiří Zahradník |
contact affiliation | The Czech Academy of Sciences, Institute of Microbiology, Vídeňská 1083, 142 20 Prague 4, Czech Republic |
contact email | zahradj@ibt.cas.cz |
lab head | |
Karel Harant |
contact affiliation | Charles University |
contact email | harant@natur.cuni.cz |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD010643 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD010643
- Label: PRIDE project
- Name: Characterization of degradative pathway of diclofenac in Raoultella sp. KDF8 resolved by comparative proteomics and metabolomics study