PXD010643-2

PXD010643 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Characterization of degradative pathway of diclofenac in Raoultella sp. KDF8 resolved by comparative proteomics and metabolomics study
Description	The widespread appearance of diclofenac as an emerging contaminant in the environment and its potential impact on living organisms is a matter of concern. Our current work uses proteomics and metabolomics to gain a better understanding of diclofenac biodegradation by the bacterial strain Raoultella sp. KDF8.
HostingRepository	PRIDE
AnnounceDate	2019-12-13
AnnouncementXML	Submission_2019-12-13_04:02:55.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Karel Harant
SpeciesList	scientific name: Raoultella sp.; NCBI TaxID: 1873496;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2018-08-01 03:48:20	ID requested
1	2019-05-06 09:12:37	announced
⏵ 2	2019-12-13 04:02:56	announced	2019-12-13: Updated publication reference for DOI(s): 10.1016/j.ibiod.2018.11.013.
3	2023-11-14 07:02:27	announced	2023-11-14: Updated project metadata.

Publication List

10.1016/j.ibiod.2018.11.013;

10.1016/j.ibiod.2018.11.013;

Keyword List

curator keyword: Biological
submitter keyword: Degradation, diclofenac, proteomics, Raoultella;

curator keyword: Biological

submitter keyword: Degradation, diclofenac, proteomics, Raoultella;

Contact List

Jiří Zahradník
contact affiliation	The Czech Academy of Sciences, Institute of Microbiology, Vídeňská 1083, 142 20 Prague 4, Czech Republic
contact email	zahradj@ibt.cas.cz
lab head
Karel Harant
contact affiliation	Charles University
contact email	harant@natur.cuni.cz
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD010643
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/05/PXD010643

PRIDE project URI

Repository Record List

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