PXD010436-1

PXD010436 is an original dataset announced via ProteomeXchange.

Title	Host cell proteome analysis follwoing HIV-1 transduction
Description	293T cells were infected with HIV-1 pseudovirions, and 0, 4 and 12 hours post-infection, the cell lysates were collected. Label-free proteomics was applied to examine the protein-level changes. Duplicate samples for six time points were collected (0, 4, and 12 hours post-transduction, virus- and mock transduced samples) and analyzed in duplicates, allowing for the measurement of two technical and two biological replicates for each time point. The results were used for the analysis of protein networks implementing both the qualitative and quantitative information.
HostingRepository	PRIDE
AnnounceDate	2019-07-23
AnnouncementXML	Submission_2019-07-23_07:22:49.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD010436
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Eva Csosz
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2018-07-16 03:37:34	ID requested
⏵ 1	2019-07-23 07:22:50	announced

Cs, ő, sz É, T, ó, th F, Mahdi M, Tsaprailis G, Emri M, T, ő, zs, é, r J, Analysis of networks of host proteins in the early time points following HIV transduction. BMC Bioinformatics, 20(1):398(2019) [pubmed]

curator keyword: Biological

submitter keyword: HIV-1, vector, label-free quantification, host cell response

Eva Csosz
contact affiliation	Proteomics Core Facility, Department of Biochemistry and Molecular Biology, Faculty of Medicine, University of Debrecn
contact email	cseva@med.unideb.hu
lab head
Eva Csosz
contact affiliation	University of Debrecen
contact email	cseva@med.unideb.hu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/07/PXD010436

PRIDE project URI

• PRIDE
  1. PXD010436
     1. Label: PRIDE project
     2. Name: Host cell proteome analysis follwoing HIV-1 transduction