PXD009966-3

PXD009966 is an original dataset announced via ProteomeXchange.

Title	Transcriptome and protein interaction profiling in cancer cells with mutations in histone H3.3
Description	This entry contains proteome data extracted from co-immunoprecipitation of engineered H3F3A locus fused to GFP in HEK293 cell line, followed by PAGE separation, in-gel proteolytic digestion and LC-MS/MS identification.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:07:36.957.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD009966
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Anders Lindroth
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	residues isobaric at 113.084064 Da; Oxidation; Carbamidomethyl
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2018-05-30 15:04:53	ID requested
1	2018-11-07 06:00:58	announced
2	2018-12-04 01:41:20	announced	Updated project metadata.
⏵ 3	2024-10-22 04:07:37	announced	2024-10-22: Updated project metadata.

10.1038/s41598-017-13887-y;

Lim J, Park JH, Baude A, Yoo Y, Lee YK, Schmidt CR, Park JB, Fellenberg J, Zustin J, Haller F, Kr, ü, cken I, Kang HG, Park YJ, Plass C, Lindroth AM, The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processing. Sci Rep, 7(1):13459(2017) [pubmed]

10.6019/PXD009966;

curator keyword: Technical, Biological

submitter keyword: Human, H3.3, Giant Cell Tumor of the Bone, LC-MS/MS

Anders Mikael Lindroth
contact affiliation	National Cancer Center Dept. of Cancer Biomedical Science, GCSP Rep. of Korea
contact email	lindroth@ncc.re.kr
lab head
Anders Lindroth
contact affiliation	National Cancer Center
contact email	lindroth@ncc.re.kr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD009966

PRIDE project URI

• PRIDE
  1. PXD009966
     1. Label: PRIDE project
     2. Name: Transcriptome and protein interaction profiling in cancer cells with mutations in histone H3.3