⮝ Full datasets listing

PXD009966-1

PXD009966 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleTranscriptome and its H3.3 G34W proteome in Giant Cell Tumor of the Bone
DescriptionThis entry contains proteome data extracted from co-immunoprecipitation of engineered H3F3A locus fused to GFP in HEK293 cell line, followed by PAGE separation, in-gel proteolytic digestion and LC-MS/MS identification.
HostingRepositoryPRIDE
AnnounceDate2018-11-07
AnnouncementXMLSubmission_2018-11-07_06:00:56.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD009966
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterAnders Lindroth
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListresidues isobaric at 113.084064 Da; Oxidation; Carbamidomethyl
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02018-05-30 15:04:53ID requested
12018-11-07 06:00:58announced
22018-12-04 01:41:20announcedUpdated project metadata.
32024-10-22 04:07:37announced2024-10-22: Updated project metadata.
Publication List
Lim J, Park JH, Baude A, Yoo Y, Lee YK, Schmidt CR, Park JB, Fellenberg J, Zustin J, Haller F, Kr, ΓΌ, cken I, Kang HG, Park YJ, Plass C, Lindroth AM, The histone variant H3.3 G34W substitution in giant cell tumor of the bone link chromatin and RNA processing. Sci Rep, 7(1):13459(2017) [pubmed]
Keyword List
curator keyword: Technical, Biological
submitter keyword: Human, Giant Cell Tumor of the Bone, LC-MS/MS, H3.3
Contact List
Anders Mikael Lindroth
contact affiliationNational Cancer Center Dept. of Cancer Biomedical Science, GCSP Rep. of Korea
contact emaillindroth@ncc.re.kr
lab head
Anders Lindroth
contact affiliationNational Cancer Center
contact emaillindroth@ncc.re.kr
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/11/PXD009966
PRIDE project URI
Repository Record List
[ + ]