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PXD005720-2

PXD005720 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleReference dataset for EnCOUNTer tool development
DescriptionReference dataset used for the development of the EnCOUNTEr tool to both (i) score all characterized peptides using discriminant parameters to evidence mature protein N-termini and (ii) determine the N-terminus acetylation yield for the most reliable ones.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:34:46.651.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterWilly Bienvenut
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListacetate labeling reagent (N-term) (heavy form, +3amu); 3x(2)H labeled N6-acetyl-L-lysine; iodoacetamide derivatized residue
InstrumentLTQ Orbitrap
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-01-16 11:27:13ID requested
12017-03-14 08:25:21announced
22024-10-22 04:34:47announced2024-10-22: Updated project metadata.
Publication List
Dataset with its publication pending
Keyword List
curator keyword: Technical
submitter keyword: organelle proteins, Mature N-terminal, Transit peptide cleavage site, Acetylation quantitation,N-terminal modifications, processing tool
Contact List
Willy Bienvenut
contact affiliationInstitute of Integrative Biology of the Cell (I2BC), CEA, CNRS, Université Paris-Sud, Avenue de la Terrasse, F-91198 Gif-sur-Yvette cedex, France
contact emailwilly.bienvenut@i2bc.paris-saclay.fr
lab head
Willy Bienvenut
contact affiliationCNRS
contact emailwilly.bienvenut@universite-paris-saclay.fr
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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