PXD005680-2

PXD005680 is an original dataset announced via ProteomeXchange.

Title	Application of Simulation Model to Uncover the Mechanisms of Flooding Tolerance and Difference between Flooding and Drought in Soybean
Description	To decipher stress responses under flooding and drought as well as flooding-tolerant mechanisms in soybean, the mathematic biological approach of simulation model was applied. Furthermore, wild-type soybean with ABA treatment and flooding-tolerant mutant line, which displayed flooding tolerance, were used as the flooding-tolerant materials. Proteins acquired by gel-free/label-free proteomic technique were used for simulation model of responses under different stresses and flooding tolerant.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:35:20.321.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Wang Xin
SpeciesList	scientific name: Glycine max; NCBI TaxID: 3847;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-10 01:52:21	ID requested
1	2018-10-26 11:04:29	announced
⏵ 2	2024-10-22 04:35:22	announced	2024-10-22: Updated project metadata.

10.3390/ijms19051301;

Wang X, Sakata K, Komatsu S, An Integrated Approach of Proteomics and Computational Genetic Modification Effectiveness Analysis to Uncover the Mechanisms of Flood Tolerance in Soybeans. Int J Mol Sci, 19(5):(2018) [pubmed]

curator keyword: Technical

submitter keyword: simulation, proteomics, mutant,abscisic acid, root, soybean, drought, flooding

Setsuko Komatsu
contact affiliation	NARO Institute of Crop Science
contact email	komatsu.setsuko.fu@u.tsukuba.ac.jp
lab head
Wang Xin
contact affiliation	NARO Institute of Crop Science
contact email	wangxin@affrc.go.jp
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD005680

PRIDE project URI

• PRIDE
  1. PXD005680
     1. Label: PRIDE project
     2. Name: Application of Simulation Model to Uncover the Mechanisms of Flooding Tolerance and Difference between Flooding and Drought in Soybean