PXD021549

PXD021549 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Hidden Proteome of Synaptic Vesicles in the Mammalian Brain
Description	current synapse proteomics are restricted to “average” composition of abundant synaptic proteins. Here we performed a subcellular proteomic workflow that could identify and quantify the deep proteome of synaptic vesicles purified from rat whole brain, including previously missing proteins present in a small percentage of central synapses. This synaptic vesicle proteome newly detected many proteins of physiological and pathological relevance particularly in low abundance range, thus providing a resource for future investigations on diversified synaptic functions and neuronal dysfunctions. Raw data from 3 replicates of synaptosomes (P2') and 3 replicates of SV are deposited here. Each replicate coming from 24 fractions from a peptide fractionation step in the workflow.
HostingRepository	jPOST
AnnounceDate	2020-12-31
AnnouncementXML	Submission_2022-09-18_02:55:04.638.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Zacharie Taoufiq
SpeciesList	scientific name: Rattus norvegicus albus; NCBI TaxID: 947987;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2020-09-17 18:03:53	ID requested
1	2020-12-30 07:00:09	announced
2	2021-02-04 17:09:23	announced	2021-02-04: Updated FTP location.
⏵ 3	2022-09-18 02:55:05	announced	2022-09-18: Updated FTP location.

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: rat, Synapse, deep proteomics, synaptic vesicles, neurotransmission

submitter keyword: rat, Synapse, deep proteomics, synaptic vesicles, neurotransmission

Contact List

Zacharie Taoufiq
lab head
Zacharie Taoufiq
contact affiliation	Okinawa Institute of Science and Technology, Graduate University
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000968/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000968/