PXD021549-1
PXD021549 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Hidden Proteome of Synaptic Vesicles in the Mammalian Brain |
Description | current synapse proteomics are restricted to “average” composition of abundant synaptic proteins. Here we performed a subcellular proteomic workflow that could identify and quantify the deep proteome of synaptic vesicles purified from rat whole brain, including previously missing proteins present in a small percentage of central synapses. This synaptic vesicle proteome newly detected many proteins of physiological and pathological relevance particularly in low abundance range, thus providing a resource for future investigations on diversified synaptic functions and neuronal dysfunctions. Raw data from 3 replicates of synaptosomes (P2') and 3 replicates of SV are deposited here. Each replicate coming from 24 fractions from a peptide fractionation step in the workflow. |
HostingRepository | jPOST |
AnnounceDate | 2020-12-31 |
AnnouncementXML | Submission_2020-12-30_07:00:08.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Zacharie Taoufiq |
SpeciesList | scientific name: Rattus norvegicus albus; NCBI TaxID: 947987; |
ModificationList | S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2020-09-17 18:03:53 | ID requested | |
⏵ 1 | 2020-12-30 07:00:09 | announced | |
2 | 2021-02-04 17:09:23 | announced | 2021-02-04: Updated FTP location. |
3 | 2022-09-18 02:55:05 | announced | 2022-09-18: Updated FTP location. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: rat, Synapse, deep proteomics, synaptic vesicles, neurotransmission |
Contact List
Zacharie Taoufiq | |
---|---|
lab head | |
Zacharie Taoufiq | |
contact affiliation | Okinawa Institute of Science and Technology, Graduate University |
dataset submitter |
Full Dataset Link List
jPOST dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://jpost.pharm.kyoto-u.ac.jp/repository/JPST000968 |