PXD020223 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Extremely haloalkaliphilic CO-utilizing acetogen from a hypersaline soda lake |
| Description | When using CO as the electron donor instead of formate in an enrichment of methyl-reducing methanogens from a hypersaline soda lake in Siberia resulted in a methane-forming binary culture whereby CO was utilized by a bacterium and not a methanogenic partner. The bacterial isolate, strain ANCO1, forms a deep-branching phylogenetic lineage of the level of a new family within the Firmicutes class "Natranaerobiia" which members originate exclusively from soda lakes. |
| HostingRepository | PRIDE |
| AnnounceDate | 2021-07-30 |
| AnnouncementXML | Submission_2021-07-30_11:09:13.513.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Martin Pabst |
| SpeciesList | scientific name: uncultured haloalkaliphilic bacterium; NCBI TaxID: 1455636; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2020-07-06 15:07:23 | ID requested | |
| ⏵ 1 | 2021-07-30 11:09:13 | announced | |
| 2 | 2021-08-05 02:23:28 | announced | 2021-08-05: Updated project metadata. |
| 3 | 2021-12-22 03:28:23 | announced | 2021-12-22: Updated project metadata. |
| 4 | 2022-03-14 09:47:15 | announced | 2022-03-14: Updated project metadata. |
Publication List
Keyword List
| submitter keyword: Soda lake, haloalkaliphilic, carboxydotrophic, acetogen, Shot-gun proteomics, QE plus |
Contact List
| Dr Martin Pabst |
|---|
| contact affiliation | Department of Biotechnology, TU Delft, NL |
| contact email | m.pabst@tudelft.nl |
| lab head | |
| Martin Pabst |
|---|
| contact affiliation | TUD |
| contact email | m.pabst@tudelft.nl |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/07/PXD020223 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD020223
- Label: PRIDE project
- Name: Extremely haloalkaliphilic CO-utilizing acetogen from a hypersaline soda lake
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