PXD082484-1

PXD082484 is an original dataset announced via ProteomeXchange.

Title	Nucleosides and Oligonucleotides analysis using LC-MS/MS in mouse liver
Description	Here, we establish a sequence-resolved mouse liver small-RNA epitranscriptomic database by integrating nucleoside-level modification discovery with complementary RNase T1 and RNase A LC–MS/MS oligonucleotide mapping, enabling high-confidence modification-site annotation across tRNAs, 5S and 5.8S rRNAs, miRNAs, snRNAs, and snoRNAs.
HostingRepository	PRIDE
AnnounceDate	2026-08-31
AnnouncementXML	Submission_2026-08-30_18:11:08.458.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jing Feng
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: NEWT:10090;
ModificationList	monomethylated residue
Instrument	Q Exactive HF; Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2026-08-13 10:06:12	ID requested
⏵ 1	2026-08-30 18:11:08	announced

Dataset with its publication pending

submitter keyword: Mouse, Liver, Oligonucleotide, Nucleoside, LC-MS/MS

Xiang Zhang
contact affiliation	Department of Chemistry, University of Louisville, 2210 South Brook Street, Louisville, KY 40208, USA.
contact email	xiang.zhang@louisville.edu
lab head
Jing Feng
contact affiliation	University of Louisville
contact email	jing.feng@louisville.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/08/PXD082484

PRIDE project URI

• PRIDE
  1. PXD082484
     1. Label: PRIDE project
     2. Name: Nucleosides and Oligonucleotides analysis using LC-MS/MS in mouse liver