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PXD081578-1

PXD081578 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleNAGK sulfonylation data associated with "A lysis-derived PMSF and orthovanadate oxidant defines a distinct cysteine-engagement profile"
DescriptionThe N-acetylglucosamine kinase, NAGK, was found to undergo a mobility shift on SDS-PAGE that was reliant on the presence of PMSF and orthovanadate in the lysis buffer. The mobility shift was prevented by the addition of reducing agent to the lysis buffer, so in the assay described and deposited here, we incubated human recombinant NAGK with (sample names = “plus”) or without (sample names = “minus”) PMSF and orthovanadate, ran the protein on SDS PAGE, and excised the shifted (top) and unshifted (bottom) bands for mass spectrometry-based identification of the modification. NAGK C217 was sulfonylated in the presence of PMSF and orthovanadate, indicating the two lysis buffer components generate an oxidant during cell lysis that engages cysteines. We found that NAGK is not the only target of the PMSF/orthovanadate oxidant, and that it engages a unique subset of cysteines relative to another vanadium-based oxidant.
HostingRepositoryPRIDE
AnnounceDate2026-08-08
AnnouncementXMLSubmission_2026-08-07_18:41:27.486.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterBethany Schaffer
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationListacetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02026-07-24 01:02:30ID requested
12026-08-07 18:41:27announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: NAGK, PMSF, sulfonylation, orthovanadate
Contact List
John Blenis
contact affiliationDepartments of Pharmacology and Biochemistry and the Sandra and Edward Meyer Cancer Center at Weill Cornell Medicine
contact emailjob2064@med.cornell.edu
lab head
Bethany Schaffer
contact affiliationFormer postdoc at Weill Cornell Medicine, uploading data for paper pending acceptance from my postdoc. Currently at a startup
contact emailbethany.eleanor@gmail.com
dataset submitter
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Dataset FTP location
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