PXD075498-1

PXD075498 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	DDA and DIA analysis of calf thymus histone modifications using Prop-PIC derivatization
Description	Comprehensive analysis of rhe histone marks from calf thymus
HostingRepository	PRIDE
AnnounceDate	2026-06-15
AnnouncementXML	Submission_2026-06-15_04:23:24.449.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Cristina Chiva
SpeciesList	scientific name: Bos taurus (Bovine); NCBI TaxID: NEWT:9913;
ModificationList	monomethylated residue; N6; acetylated residue; dimethylated residue
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2026-03-11 06:44:30	ID requested
⏵ 1	2026-06-15 04:23:25	announced

Publication List

10.1021/acs.analchem.5c08017;
Nameni A, Declercq A, Gabriels R, Devreese R, Degroeve S, De Maesschalck A, Dhaenens M, Chiva C, Sabid, ó E, Martens L, Bouwmeester R, iDeepLC: Chemical Structure Information Yields Improved Retention Time Prediction of Peptides with Unseen Modifications. Anal Chem, 98(24):17707-17717(2026) [pubmed]

10.1021/acs.analchem.5c08017;

Nameni A, Declercq A, Gabriels R, Devreese R, Degroeve S, De Maesschalck A, Dhaenens M, Chiva C, Sabid, ó E, Martens L, Bouwmeester R, iDeepLC: Chemical Structure Information Yields Improved Retention Time Prediction of Peptides with Unseen Modifications. Anal Chem, 98(24):17707-17717(2026) [pubmed]

Keyword List

submitter keyword: histones, DIA, marks, DDA

submitter keyword: histones, DIA, marks, DDA

Contact List

Eduard Sabidó
contact affiliation	1Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Dr Aiguader 88, 08003 Barcelona, Spain. 2Universitat Pompeu Fabra, Dr Aiguader 88, 08003 Barcelona, Spain.
contact email	eduard.sabido@crg.eu
lab head
Cristina Chiva
contact affiliation	University Pompeu Fabra
contact email	cristina.chiva@upf.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/06/PXD075498
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/06/PXD075498

PRIDE project URI

Repository Record List

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