⮝ Full datasets listing

PXD073977-1

PXD073977 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleQuantitative Proteomic Profiling of Bronchoalveolar Lavage-Derived Extracellular Vesicles in Murine Asthma Model
DescriptionExtracellular vesicles (EVs) are increasingly recognized as key mediators of intercellular communication and immune regulation. However, their proteomic composition in allergic asthma remains poorly understood. In this study, we performed tandem mass tag (TMT)-based quantitative proteomic analyses of the whole bronchoalveolar lavage fluid (BALF) supernatant and EVs enriched from BALF in a murine model of house dust mite (HDM)-induced asthma. Using LC-MS/MS analysis in the data-dependent acquisition (DDA) mode, we identified more than 400 proteins across all samples, revealing distinct enrichment of canonical EV markers in EV fractions. HDM challenge induced significant upregulation of Th2-associated proteins, e.g., CLCA1, FCGBP, CHIL3, CHIL4, and RETNLA, consistent with hallmark features of asthma. Notably, proteins such as EPX and CKM were detected exclusively in EVs, not in whole BALF, underscoring the potential of EVs to selectively carry disease-relevant proteins. Our results provided insights into the distinct proteomic profiles of EV-associated versus BALF proteins, highlighting potential EV-mediated mechanisms in asthma pathogenesis.
HostingRepositoryPRIDE
AnnounceDate2026-04-20
AnnouncementXMLSubmission_2026-04-20_13:20:27.948.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterZachary Hutchins
SpeciesList scientific name: Mus musculus (Mouse); NCBI TaxID: NEWT:10090;
ModificationListTMT6plex-126 reporter+balance reagent acylated residue; acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentOrbitrap Fusion Lumos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02026-02-02 21:30:16ID requested
12026-04-20 13:20:28announced
Publication List
10.1021/ACS.CHEMRESTOX.6C00094;
Keyword List
submitter keyword: ultracentrifugation, mouse model, asthma, TMT, mass spectrometry,Extracellular vesicles, HDM, bronchoalveolar lavage fluid
Contact List
Yinsheng Wang
contact affiliationDepartment of Chemistry, University of California, Riverside, CA 92502, USA
contact emailyinsheng@ucr.edu
lab head
Zachary Hutchins
contact affiliationUniversity of California, Riverside
contact emailzachary.hutchins@email.ucr.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/04/PXD073977
PRIDE project URI
Repository Record List
[ + ]