PXD072851-1

PXD072851 is an original dataset announced via ProteomeXchange.

Title	Glycopeptide analysis of A549 cells after influenza A infection
Description	Influenza A virus (IAV) hijacks host cellular machinery, but many virus–IAV interactions and contacting protein sites remain uncharacterised, particularly those dependent on intact cellular architecture, such as membrane-associated or phase-separated compartments. Here, we applied in-cell cross-linking mass spectrometry (XL-MS), integrated with AlphaFold-based structural modelling and functional assays, to map protein-protein contact sites in IAV-infected human cells.
HostingRepository	PRIDE
AnnounceDate	2026-04-23
AnnouncementXML	Submission_2026-04-23_11:05:08.547.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Frank Stein
SpeciesList	scientific name: Influenza A virus (A/India/P063078/2006(H3N2)); NCBI TaxID: NEWT:1032220; scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	complex glycosylation
Instrument	Orbitrap Exploris 480; Q Exactive Plus

Revision	Datetime	Status	ChangeLog Entry
0	2026-01-09 08:31:21	ID requested
⏵ 1	2026-04-23 11:05:09	announced

Dataset with its publication pending

submitter keyword: Human, Glycopeptide, LC-MS, influenza A

Jan Kosinski
contact affiliation	EMBL Hamburg, Notkestraße 85, 22607 Hamburg, Germany
contact email	jan.kosinski@embl.de
lab head
Frank Stein
contact affiliation	EMBL
contact email	frank.stein@embl.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/04/PXD072851

PRIDE project URI

• PRIDE
  1. PXD072851
     1. Label: PRIDE project
     2. Name: Glycopeptide analysis of A549 cells after influenza A infection