⮝ Full datasets listing
PXD072252-1
PXD072252 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Proteomic analysis of redox PTMs in HCoV-229E-infected immortalized human lung fibroblasts (MRC5) |
| Description | TMT18-labeled proteome-wide profiling of post-translational modifications (redox) in mock-infected and infected human lung epithelial cells (MRC5). Human lung epithelial (MRC5) cells were infected and mock-infected with HCoV-229E. Cells were harvested at 8, 16, and 24 hours post-infection. Extracted proteins were digested with trypsin, then TMT18-labeled and enriched for redox PTMs. Samples were split into 12 fractions and run on the Q Exactive Plus. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-12-24 |
| AnnouncementXML | Submission_2025-12-24_16:56:39.097.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; scientific name: Human coronavirus 229E; NCBI TaxID: 11137; |
| ModificationList | Oxidation; Carbamidomethyl; Nethylmaleimide; TMTpro |
| Instrument | Q Exactive Plus |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-12-20 21:14:01 | ID requested | |
| ⏵ 1 | 2025-12-24 16:56:39 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: HCoV-229E, coronavirus, human lung, post-translational modifications, redox, DatasetType:Proteomics |
Contact List
| Tong Zhang | |
|---|---|
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | tong.zhang@pnnl.gov |
| lab head | |
| Amy Sims | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | amy.sims@pnnl.gov |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000100296/ |
