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PXD071378-1

PXD071378 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleInduced ubiquitination of the partially disordered Estrogen Receptor alpha protein via a 14-3-3-directed molecular glue-based PROTAC design
DescriptionProteins lacking defined ligandable pockets remain challenging drug targets. Here, we develop a molecular glue-based PROTAC (MGPROTACs) approach that chemically conjugates a molecular glue stabilizer to a VHL-recruiting ligand to capture and ubiquitinate the 14-3-3/Estrogen Receptor α (ERα) complex. Our designed MGPROTACs engage a composite interface between 14-3-3 and the disordered F-domain of ERα, promoting cooperative complex formation and target ubiquitination. Biophysical characterization revealed distinct linker-dependent cooperativities across the MGPROTAC series, which influenced both cellular permeability and ubiquitination efficiency. Cryo-EM of the most cooperative MGPROTAC uncovers de novo VHL–14-3-3ζ contacts, while molecular dynamics simulations rationalize the stabilizing interactions underlying cooperativity. Strikingly, finetuning linker design enables selective ubiquitination of distinct complex subunits. These findings establish a structural and mechanistic framework for integrating molecular glue and PROTAC principles, expanding the scope of drug discovery to previously intractable protein complexes
HostingRepositoryPRIDE
AnnounceDate2026-07-07
AnnouncementXMLSubmission_2026-07-07_03:10:39.742.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterGajanan Sathe
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationListubiquitination signature dipeptidyl lysine
InstrumentOrbitrap Ascend
Dataset History
RevisionDatetimeStatusChangeLog Entry
02025-11-28 13:26:07ID requested
12026-07-07 03:10:40announced
Publication List
10.1038/S41467-026-75333-W;
Keyword List
submitter keyword: Estrogen Receptor α (ERα) ,PROTAC,TPD,14-3-3
Contact List
Peter Cossar
contact affiliationPrincipal Investigator Centre for Targeted Protein Degradation University of dundee
contact emailPCossar001@dundee.ac.uk
lab head
Gajanan Sathe
contact affiliationCentre for Targeted Protein Degradation (CeTPD) University of Dundee
contact emailgsathe001@dundee.ac.uk
dataset submitter
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