⮝ Full datasets listing
PXD070844-1
PXD070844 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Nitrous oxide reduction over a broad pH range by a novel Schinkia sp. |
| Description | Shotgun proteomics was used to profile Schinkia acidoalkalinis strain CFF1, a newly isolated N2O-reducing bacterium capable of respiration. Genome analysis identified four clade II nosZ genes, and proteomics detected two of these under both alkaline and acidic growth conditions. For the proteomic results, samples C1, C2, and C3 are from a pH 8.5 condition, and samples C4, C5, and C6 from a pH 4.5 condition. The dataset includes raw MS files, Proteome Discoverer search outputs, and peptide-level quantification. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-05-13 |
| AnnouncementXML | Submission_2026-05-13_06:44:39.608.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Megan Davin |
| SpeciesList | scientific name: Schinkia acidoalkalinis CFF1; |
| ModificationList | L-methionine sulfoxide; Met-loss; Met-loss+Acetyl; S-carboxamidomethyl-L-cysteine |
| Instrument | Q Exactive Plus |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-11-17 09:18:37 | ID requested | |
| ⏵ 1 | 2026-05-13 06:44:40 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: NosZ, N2O reduction, pH, denitrification, greenhouse gas emissions, Schinkia, DatasetType:Proteomics |
Contact List
| Frank E. Loffler | |
|---|---|
| contact affiliation | University of Tennessee-Knoxville |
| contact email | frank.loeffler@utk.edu |
| lab head | |
| Dr. Robert Hettich | |
| contact affiliation | Oak Ridge National Laboratory |
| contact email | hettichrl@ornl.gov |
| lab head | |
| Megan Davin | |
| contact affiliation | UTK/ORNL |
| contact email | mellio35@vols.utk.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000099934/ |
