PXD068444-1

PXD068444 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Integrative multi-omics analysis of dietary fibre-induced modulations in the composition and function of chicken caecal microbiota
Description	We collected caecal contents from 30 chickens divided into 5 groups (6 birds per group) with each group receiving different quantity of soluble inulin and insoluble cellulose. We isolated DNA, RNA, and proteins to perform metagenomics, metatranscriptomics, and metaproteomics analysis, respectively.
HostingRepository	PRIDE
AnnounceDate	2025-09-17
AnnouncementXML	Submission_2025-09-17_02:52:15.805.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Anum Ahmad
SpeciesList	scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031;
ModificationList	No PTMs are included in the dataset
Instrument	Thermo Fisher Scientific instrument model

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-09-17 02:05:02	ID requested
⏵ 1	2025-09-17 02:52:16	announced

Publication List

10.1101/2025.08.27.672358;

10.1101/2025.08.27.672358;

Keyword List

submitter keyword: dietary fibre, metatranscriptomics,chicken, multiomics, cellulose, ceacal microbiota, metagenomics, inulin, metaproteomics

submitter keyword: dietary fibre, metatranscriptomics,chicken, multiomics, cellulose, ceacal microbiota, metagenomics, inulin, metaproteomics

Contact List

Laura Glendinning
contact affiliation	The Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Easter Bush Campus, Midlothian, EH25 9RG, UK
contact email	Laura.Glendinning@roslin.ed.ac.uk
lab head
Anum Ahmad
contact affiliation	The Roslin Institute, University of Edinburgh
contact email	aahmad3@ed.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD068444
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD068444

PRIDE project URI

Repository Record List

[ + ]