PXD067382 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Proteomics of Arabidopsis thaliana leaves after silencing of MKIP1 or uL4c |
| Description | Arabidopsis thaliana (Arabidopsis) MATURASE K INTERACTING PROTEIN1 (MKIP1) is a plastid-localized, non-canonical member of the starch-branching enzyme family. Inducible silencing of MKIP1 by estradiol-treatment results in pale newly emerged leaves. Here we analysed the proteome of these leaves from two independent plant lines by LC-MS/MS using data-independent acquisition. Estradiol-treated wild-type (Col-0) plants and a line in which the plastidial ribosomal subunit uL4c was silenced served as controls. Data was analysed using DIA-NN via the FragPipe platform. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-02-10 |
| AnnouncementXML | Submission_2026-02-10_06:52:36.828.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Barbara Pfister |
| SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: NEWT:3702; |
| ModificationList | iodoacetamide derivatized residue |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2025-08-15 01:45:02 | ID requested | |
| ⏵ 1 | 2026-02-10 06:52:37 | announced | |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: Arabidopsis,LC-MS/MS, DIA, ribosome, chloroplast |
Contact List
| Samuel C. Zeeman |
|---|
| contact affiliation | Plant Biochemistry group, Institute of Molecular Plant Biology, Department of Biology, ETH Zurich |
| contact email | szeeman@ethz.ch |
| lab head | |
| Barbara Pfister |
|---|
| contact affiliation | ETH Zurich |
| contact email | bpfister@ethz.ch |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
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| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD067382
- Label: PRIDE project
- Name: Proteomics of Arabidopsis thaliana leaves after silencing of MKIP1 or uL4c
