PXD067064-1

PXD067064 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Human Plasma Discovery Proteomics
Description	This study addresses this gap by conducting a direct comparison of eight platforms, representing both affinity-based and diverse mass spectrometry approaches, and covering over 13,000 proteins. By applying these platforms to the same cohort, we systematically assess their performance, identifying key differences and complementary strengths. Our findings offer valuable insights for researchers, highlighting trade-offs in coverage and their implications for biomarker discovery and clinical applications. This study serves as an essential resource, offering both technical evaluation and biological insights to support the development of novel diagnostics and therapeutics through plasma proteomics.
HostingRepository	PRIDE
AnnounceDate	2025-10-06
AnnouncementXML	Submission_2025-10-05_22:36:22.900.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sara Ahadi
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-08-07 06:19:42	ID requested
⏵ 1	2025-10-05 22:36:23	announced

Publication List

Kirsher DY, Chand S, Phong A, Nguyen B, Szoke BG, Ahadi S, Current landscape of plasma proteomics from technical innovations to biological insights and biomarker discovery. Commun Chem, 8(1):279(2025) [pubmed]
10.1038/s42004-025-01665-1;

Kirsher DY, Chand S, Phong A, Nguyen B, Szoke BG, Ahadi S, Current landscape of plasma proteomics from technical innovations to biological insights and biomarker discovery. Commun Chem, 8(1):279(2025) [pubmed]

10.1038/s42004-025-01665-1;

Keyword List

submitter keyword: Human, mass spec, proteomics, targeted mass spec, plasma, affinity

submitter keyword: Human, mass spec, proteomics, targeted mass spec, plasma, affinity

Contact List

Sara Ahadi
contact affiliation	Alkahest Inc.
contact email	saraahadi@gmail.com
lab head
Sara Ahadi
contact affiliation	Alkahest Inc.
contact email	saraahadi@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD067064
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD067064

PRIDE project URI

Repository Record List

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