PXD064808 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Pulldown of RNA binding protein using SARS CoV 2 NSP1 RNA |
| Description | RNA sensing is critical for RLR activation and downstream signaling. To identify molecules that are involved in modulating viral RNA recognition, we utilized biotin-labeled 60 nt single-stranded RNA (ssRNA) from SARS-CoV-2 NSP1 coding region (NSP1 ssRNA) to pull down proteins from RAW264.7 cells. The elutes from biotin-labeled NSP1 ssRNA and control NSP1 ssRNA were subjected to coomassie blue (CBB) staining and liquid chromatography-mass spectrometry (LC-MS). CSDE1, a protein from the cold shock domain protein family, was identified as a potential NSP1 RNA interacting protein. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-04-08 |
| AnnouncementXML | Submission_2026-04-07_20:19:05.350.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Yi Zheng |
| SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: NEWT:10090; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive HF |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2025-06-09 23:53:56 | ID requested | |
| ⏵ 1 | 2026-04-07 20:19:05 | announced | |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: Pulldown |
| RNA binding protein |
| NSP1 RNA |
| SARS-CoV-2 |
Contact List
| Yi Zheng |
|---|
| contact affiliation | Shandong University |
| contact email | zhengyiabc2011@sdu.edu.cn |
| lab head | |
| Yi Zheng |
|---|
| contact affiliation | Shandong University |
| contact email | zhengyiabc2011@sdu.edu.cn |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
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| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD064808
- Label: PRIDE project
- Name: Pulldown of RNA binding protein using SARS CoV 2 NSP1 RNA
