⮝ Full datasets listing

PXD063271-1

PXD063271 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleNuclear proteome analysis of mouse preimplantation embryos
DescriptionMouse embryos at the 2-cell to 8-cell stages were collected and treated with acidic Tyrode’s solution to remove the zona pellucida. Subsequently, embryos were split into single blastomeres, and nuclei were isolated from each blastomere using a micromanipulator. Proteomic samples were then prepared using the in situ digestion of alcohol-fixed cells (iSDAC) method with 50 (2-cell), 216 (4-cell), and 280 (8-cell) nuclei per sample. The nuclear proteome during mouse preimplantation development was identified by label-free quantification.
HostingRepositoryjPOST
AnnounceDate2026-04-24
AnnouncementXMLSubmission_2026-04-23_08:00:17.316.xml
DigitalObjectIdentifier
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterAyaka Kakihara
SpeciesList scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationListS-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue; L-methionine sulfoxide
Instrumentinstrument
Dataset History
RevisionDatetimeStatusChangeLog Entry
02025-04-24 00:37:33ID requested
12026-04-23 08:00:17announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: preimplantation embryos, early development, developmental engineering, nuclear proteome
Contact List
Masaki Matsumoto
lab head
Ayaka Kakihara
contact affiliationNiigata University
dataset submitter
Full Dataset Link List
jPOST dataset URI
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003777/