⮝ Full datasets listing
PXD061697-1
PXD061697 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Experiments using TurboID and BPA crosslinking to identify interactions between SNIPE, ManYZ, and phage proteins |
| Description | TurboID was fused to different inner membrane proteins and proximity labeling + streptavidin bead pulldowns were used to identify biotinylated proteins. Separately, BPA was incorporated into SNIPE-FLAG and crosslinked to phage and host proteins with UV exposure, followed by anti-FLAG pulldowns and mass spectrometry to identify crosslinked proteins. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-01-13 |
| AnnouncementXML | Submission_2026-01-13_14:02:09.548.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Daniel Saxton |
| SpeciesList | scientific name: Escherichia coli K-12; NCBI TaxID: 83333; scientific name: Escherichia virus Lambda; NCBI TaxID: 10710; scientific name: Escherichia phage TheodorHerzl NC_073062.1; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-03-11 06:59:45 | ID requested | |
| ⏵ 1 | 2026-01-13 14:02:10 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: TurboID, Phage defense, Tape measure protein, DatasetType:Proteomics |
Contact List
| Michael Laub | |
|---|---|
| contact affiliation | Massachusetts Institute of Technology |
| contact email | laub@mit.edu |
| lab head | |
| Daniel Saxton | |
| contact affiliation | MIT |
| contact email | dsaxton@mit.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v09/MSV000097285/ |
