PXD061233-1

PXD061233 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Acclimation of Synechocystis sp. PCC 6803 to alkaline pH under ambient air
Description	Cyanobacteria are able to grow at a wide pH range and for many strains their growth is enhanced in alkaline environment. In this study, we investigated the proteomic response of the cyanobacterium of Synechocystis sp. PCC 6803 to alkaline pH. The proteomes of Synechocystis grown in BG-11 medium buffered at pH 7.5, pH 8.2 and pH 9.2 were analysed by a mass spectrometry-based (LC-MS/MS) data-dependent acquisition (DDA) method. Total proteins (membrane and soluble) from unfractionated Synechocystis cell lysates were investigated.
HostingRepository	PRIDE
AnnounceDate	2025-09-04
AnnouncementXML	Submission_2025-09-04_01:42:08.569.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD061233
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Henna Mustila
SpeciesList	scientific name: Synechocystis sp. (strain PCC 6803 / Kazusa); NCBI TaxID: 1111708;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-02-26 13:50:17	ID requested
⏵ 1	2025-09-04 01:42:08	announced

Publication List

10.1111/PPL.70474;
10.6019/PXD061233;

10.1111/PPL.70474;

10.6019/PXD061233;

Keyword List

submitter keyword: LC-MSMS,Cyanobacterium, pH

submitter keyword: LC-MSMS,Cyanobacterium, pH

Contact List

Yagut Allahverdiyeva
contact affiliation	University of Turku, Faculty of Technology, Department of Life Technologies, Molecular Plant Biology Unit, Tykistökatu 6, 20520 Turku Finland
contact email	allahve@utu.fi
lab head
Henna Mustila
contact affiliation	University of Turku
contact email	henna.mustila@utu.fi
dataset submitter

Full Dataset Link List

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PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD061233

PRIDE project URI

Repository Record List

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