PXD060602-1

PXD060602 is an original dataset announced via ProteomeXchange.

Title	Carbon Limitation in Nitrososphaera viennensis
Description	Information on the files related to the respective experiments can be found in the metadata file titled “Metadata_for_Nviennensis_Carbon_Experiment.xlsx”. The ammonia-oxidizing archaeon Nitrososphaera viennensis was subjected to various levels of carbon limitation based on predictions from a thermodynamic model. Catalase or pyruvate was used as a reactive oxygen species scavenger. A combined extraction of proteins and metabolites was performed in each condition to evaluate the cellular response to carbon limitation. The proteomic data associated with the project can be found here.
HostingRepository	PRIDE
AnnounceDate	2025-09-24
AnnouncementXML	Submission_2025-09-24_02:41:42.896.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD060602
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Logan Hodgskiss
SpeciesList	scientific name: Nitrososphaera viennensis EN76; NCBI TaxID: 926571;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive Plus

Revision	Datetime	Status	ChangeLog Entry
0	2025-02-09 07:08:25	ID requested
⏵ 1	2025-09-24 02:41:43	announced

10.1128/MSYSTEMS.00732-25;

10.6019/PXD060602;

submitter keyword: nitrogen cycle, ROS, oxidative stress,ammonia-oxidizing archaea, carbon

Prof. Dr.
contact affiliation	Archaea Ecology and Evolution, Department of Functional and Evolutionary Ecology, University of Vienna
contact email	christa.schleper@univie.ac.at
lab head
Logan Hodgskiss
contact affiliation	University of Vienna
contact email	logan.hodgskiss@univie.ac.at
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD060602

PRIDE project URI

• PRIDE
  1. PXD060602
     1. Label: PRIDE project
     2. Name: Carbon Limitation in Nitrososphaera viennensis