PXD060337-1

PXD060337 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomic analysis to assess the impact of storage media on human gut microbiome in fecal samples
Description	We performed a mass spectrometry-based metaproteomic study to assess the impact of storage media on human gut microbiome in fecal samples. We evaluated FDA-authorized OMNIgene·GUT (OG), phosphate-buffered saline (PBS), and RNALater (RNAL) buffers.
HostingRepository	PRIDE
AnnounceDate	2025-10-13
AnnouncementXML	Submission_2025-10-12_17:48:36.717.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Van-An Duong
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-01-29 13:12:17	ID requested
⏵ 1	2025-10-12 17:48:37	announced

Publication List

10.1002/pmic.70035;
Duong VA, Pan E, Dabral P, Utzschneider KM, Lampe JW, Chen R, A J Hullar M, Metaproteomic Analysis to Assess the Impact of Storage Media on Human Gut Microbiome in Fecal Samples. Proteomics, 25(19):39-49(2025) [pubmed]

10.1002/pmic.70035;

Duong VA, Pan E, Dabral P, Utzschneider KM, Lampe JW, Chen R, A J Hullar M, Metaproteomic Analysis to Assess the Impact of Storage Media on Human Gut Microbiome in Fecal Samples. Proteomics, 25(19):39-49(2025) [pubmed]

Keyword List

submitter keyword: Metaproteomics
bottom-up proteomics
mass spectrometry
bioinformatics
human gut microbiome
fecal sample
storage media

submitter keyword: Metaproteomics

bottom-up proteomics

mass spectrometry

bioinformatics

human gut microbiome

fecal sample

storage media

Contact List

Ru Chen
contact affiliation	Baylor College of Medicine, Houston, TX 77030
contact email	Ru.Chen@bcm.edu
lab head
Van-An Duong
contact affiliation	The University of Texas Health Science Center at Houston
contact email	van.an.duong@uth.tmc.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD060337
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD060337

PRIDE project URI

Repository Record List

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