PXD059692 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Proteomics results of rice seeds |
| Description | To explore the isomerization levels of proteins in the seed, we performed a mass spectrometry-based proteomics analysis of the seed samples from the Nip and Daat1 groups. We achieved a robust workflow with high proteome depth, quantifying 1925 nip and 1868 Daat1 proteins, of which 1702 were shared proteins. By screening the proteins with the algorithm, both the isomerization levels and degrees of proteins were altered in daat1 compared with wild type. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-02-20 |
| AnnouncementXML | Submission_2026-02-20_00:28:22.819.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Gongyu Li |
| SpeciesList | scientific name: Oryza sativa (Rice); NCBI TaxID: NEWT:4530; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Orbitrap Fusion |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2025-01-12 20:26:28 | ID requested | |
| ⏵ 1 | 2026-02-20 00:28:23 | announced | |
Publication List
| Dataset with its publication pending |
Keyword List
| submitter keyword: rice |
| seed |
| LCMS |
Contact List
| Gongyu Li |
|---|
| contact affiliation | Tianjin Key Laboratory of Biosensing and Molecular Recognition, Research Center for Analytical Science, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin 300071, China |
| contact email | ligongyu@nankai.edu.cn |
| lab head | |
| Gongyu Li |
|---|
| contact affiliation | Nankai University |
| contact email | ligongyu@nankai.edu.cn |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/02/PXD059692 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD059692
- Label: PRIDE project
- Name: Proteomics results of rice seeds
