PXD059661-1

PXD059661 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomic analysis of role of LINE-1 transposable elements in the exit of human pluripotency and early brain development
Description	We explore the proteomic profile of long interspersed nuclear element 1 (LINE-1) in human induced pluripotent stem cells using data-independent acquisition mass spectrometry to investigate its role in early human developmental processes.
HostingRepository	PRIDE
AnnounceDate	2025-06-16
AnnouncementXML	Submission_2025-06-16_03:05:06.511.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sudip Ghosh
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2025-01-10 13:29:08	ID requested
⏵ 1	2025-06-16 03:05:06	announced

10.1101/2025.01.17.633315;

submitter keyword: LINE-1, data-independent acquisition, human induced pluripotent stem cells

Jenny Hansson
contact affiliation	Proteomic Hematology, Department of Experimental Medical Science, Lund Stem Cell Center, Lund University
contact email	jenny.hansson@med.lu.se
lab head
Sudip Ghosh
contact affiliation	Proteomic Hematology, Department of Experimental Medical Science, Lund Stem Cell Center, Lund University
contact email	sudip.ghosh@med.lu.se
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/06/PXD059661

PRIDE project URI

• PRIDE
  1. PXD059661
     1. Label: PRIDE project
     2. Name: Quantitative proteomic analysis of role of LINE-1 transposable elements in the exit of human pluripotency and early brain development