PXD058672-1

PXD058672 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mass spectrometry-based proteomic approach to colorectal cancer identified the cancer-associated proteins whose expression changes with the disease progression
Description	Tumor and non-tumor tissues from 19 cases of colorectal cancer were examined using DIA-based mass spectrometry. A total of 11,833 proteins were identified, including 531 of the 748 cancer-associated proteins defined in the Catalogue of Somatic Mutations in Cancer. In the comparative analysis between the tumor and non-tumor tissue groups, we observed a significant number of differentially expressed proteins, some of which consistently increased or decreased with disease progression.
HostingRepository	jPOST
AnnounceDate	2025-08-26
AnnouncementXML	Submission_2025-08-25_08:00:05.515.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ryo Konno
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; unknown modification
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-12-08 18:18:16	ID requested
⏵ 1	2025-08-25 08:00:06	announced

Publication List

Toyota N, Konno R, Iwata S, Fujita S, Kodera Y, Noguchi R, Kondo T, Kawashima Y, Yoshimatsu Y, Identification of Cancer-Associated Proteins in Colorectal Cancer Using Mass Spectrometry. Proteomes, 13(3):(2025) [pubmed]

Toyota N, Konno R, Iwata S, Fujita S, Kodera Y, Noguchi R, Kondo T, Kawashima Y, Yoshimatsu Y, Identification of Cancer-Associated Proteins in Colorectal Cancer Using Mass Spectrometry. Proteomes, 13(3):(2025) [pubmed]

Keyword List

submitter keyword: Colorectal cancer, surgical specimens, tumor tissues, non-tumor tissues, disease progression

submitter keyword: Colorectal cancer, surgical specimens, tumor tissues, non-tumor tissues, disease progression

Contact List

Yuki Yoshimatsu
lab head
Ryo Konno
contact affiliation	Kazusa DNA Research Institute.
dataset submitter

Full Dataset Link List

jPOST dataset URI
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jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003422/