PXD058537 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Multilevel analysis of response to plant growth promoting and pathogenic bacteria in Arabidopsis roots and the role of CYP71A27 in this response |
| Description | Understanding how plants distinguish between commensal and pathogenic microorganisms is one of the major challenges in the plant microbe interaction research. We previously identified a gene encoding CYP71A27 connected to camalexin, which is necessary for a plant growth promoting (PGP) activity of a number of bacterial strains. To dissect its function, we compared multilevel responses in roots of wild type Arabidopsis and the cyp71A27 mutant to two bacterial strains, a PGP Pseudomonas fluorescens CH267 and a pathogen Burkholderia glumeae PG1. We showed that the pathogen induces a greater reprogramming of the transcriptome, proteome, and metabolome than the PGP strain. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-07-23 |
| AnnouncementXML | Submission_2026-07-23_10:35:07.849.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Martin Cerny |
| SpeciesList | scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: NEWT:3702; |
| ModificationList | deamidated residue; iodoacetamide derivatized residue |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2024-12-03 10:31:05 | ID requested | |
| ⏵ 1 | 2026-07-23 10:35:09 | announced | |
Publication List
| Koprivova A, Berka M, Berkov, á V, Ristova D, T, ü, rksoy GM, Schwier M, Westhoff P, Č, ern, ý M, Kopriva S, Multilevel Analysis of Response to Plant Growth-Promoting and Pathogenic Bacteria in Arabidopsis Roots. Mol Plant Microbe Interact, 38(6):1031-1043(2025) [pubmed] |
| 10.1094/mpmi-09-25-0125-r; |
Keyword List
| submitter keyword: Plant-microbe interactions;Arabidopsis thaliana;CYP71A27;Camalexin;Pseudomonas fluorescens;Burkholderia glumeae;Plant growth promotion |
Contact List
| Martin Cerny |
|---|
| contact affiliation | Mendel University in Brno |
| contact email | martincerny83@gmail.com |
| lab head | |
| Martin Cerny |
|---|
| contact affiliation | Mendel University in Brno |
| contact email | martincerny83@gmail.com |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
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| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD058537
- Label: PRIDE project
- Name: Multilevel analysis of response to plant growth promoting and pathogenic bacteria in Arabidopsis roots and the role of CYP71A27 in this response
