PXD056259-1
PXD056259 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Phosphosite mapping on A. thaliana ERECTA |
| Description | Description: This entry contains 6 raw files. Experiment setup: Immunoaffinity purification of YFP-ERECTA from Arabidopsis thaliana. Two independent experiments conducted in 2013: first experiment has one sample and second experiment has two sample replicates. For each sample, purified YFP-ERECTA was separately digested with trypsin and chymotrypsin. LC-MS/MS analysis on a Thermo LTQ-Velos Orbitrap. MS in the orbitrap and MS/MS in the ion trap. Torii's lab provided purified YFP-ERECTA. Villen lab conducted proteomic sample preparation and MS analysis to identify phosphosites. Full search results provided (unfiltered). raw file sample; 07090.raw YFP-ERECTA trypsin; 07091.raw YFP-ERECTA chymotrypsin; 07462.raw YFP-ERECTA trypsin; 07463.raw YFP-ERECTA chymotrypsin; 07465.raw YFP-ERECTA trypsin; 07466.raw YFP-ERECTA chymotrypsin; |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-01-05 |
| AnnouncementXML | Submission_2025-01-05_22:35:23.887.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Judit Villen |
| SpeciesList | scientific name: Arabidopsis thaliana; common name: thale cress; NCBI TaxID: 3702; |
| ModificationList | Phospho |
| Instrument | LTQ Orbitrap Velos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-09-25 14:32:57 | ID requested | |
| ⏵ 1 | 2025-01-05 22:35:24 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: ERECTA, plant receptor, A. thaliana, phosphorylation |
Contact List
| Judit Villen | |
|---|---|
| contact affiliation | University of Washington |
| contact email | jvillen@gmail.com |
| lab head | |
| Judit Villen | |
| contact affiliation | University of Washington |
| contact email | jvillen@uw.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095956/ |
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