PXD055207-1

PXD055207 is an original dataset announced via ProteomeXchange.

Title	Determining the effect of hypoxia and autophagy on the immunopeptidome and the proteome
Description	Our aim is the explore whether the changes in MHC I expression observed after the inhibition of autophagy in hypoxic conditions resulted in the generation of antigens. HT29 cells were treated either in normoxia alone, normoxia and Baf A1,hypoxia alone or hypoxia and BafA1 for 24 hours. Immunopeptidomics experiment was then caried out.
HostingRepository	PRIDE
AnnounceDate	2024-11-04
AnnouncementXML	Submission_2024-11-04_05:58:11.542.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nicola Ternette
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2024-08-26 08:15:52	ID requested
⏵ 1	2024-11-04 05:58:11	announced

Dataset with its publication pending

submitter keyword: autophagy, proteomics,HT29 cells, hypoxia, immunopeptidomics

Nicola Ternette
contact affiliation	University of Oxford
contact email	nicola.ternette@ndm.ox.ac.uk
lab head
Nicola Ternette
contact affiliation	University of Oxford
contact email	nicola.ternette@ndm.ox.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/11/PXD055207

PRIDE project URI

• PRIDE
  1. PXD055207
     1. Label: PRIDE project
     2. Name: Determining the effect of hypoxia and autophagy on the immunopeptidome and the proteome