PXD054413-1

PXD054413 is an original dataset announced via ProteomeXchange.

Title	HERV Expression Profile in NCCIT
Description	Provide a comprehensive picture of HERV RNA expression through both short and long read sequencing in NCCIT cells to be used in an integrated proteogenomic analysis pipeline
HostingRepository	PRIDE
AnnounceDate	2025-01-08
AnnouncementXML	Submission_2025-01-08_12:40:30.919.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Charles Gleason
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-30 17:08:12	ID requested
⏵ 1	2025-01-08 12:40:31	announced

10.1093/NAR/GKAF011;

submitter keyword: Human, HERV, NCCIT

Lubbertus Mulder
contact affiliation	Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA
contact email	lubbertus.mulder@mssm.edu
lab head
Charles Gleason
contact affiliation	Icahn School of Medicine at Mount Sinai
contact email	charles.gleason@mssm.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD054413

PRIDE project URI

• PRIDE
  1. PXD054413
     1. Label: PRIDE project
     2. Name: HERV Expression Profile in NCCIT