PXD054378-1

PXD054378 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics study of HDAC6 silenced cells
Description	The proteomic analysis here introduced was set up and performed to figure out global perturbations of the proteome of a breast cancer human cell line in the presence/absence of HDAC6 silencing.
HostingRepository	PRIDE
AnnounceDate	2024-10-17
AnnouncementXML	Submission_2024-10-17_02:53:57.724.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD054378
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Diego Sbardella
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	ubiquitination signature dipeptidyl lysine; phosphorylated residue; acetylated residue
Instrument	Orbitrap Exploris 240

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-30 03:09:58	ID requested
⏵ 1	2024-10-17 02:53:59	announced

Publication List

10.1186/s13148-024-01725-8;
10.6019/PXD054378;
Zamperla MG, Illi B, Barbi V, Cencioni C, Santoni D, Gagliardi S, Garofalo M, Zingale GA, Pandino I, Sbardella D, Cipolla L, Sabbioneda S, Farsetti A, Ripamonti C, Fossati G, Steink, ü, hler C, Gaetano C, Atlante S, HDAC6 inhibition disrupts HDAC6-P300 interaction reshaping the cancer chromatin landscape. Clin Epigenetics, 16(1):109(2024) [pubmed]

10.1186/s13148-024-01725-8;

10.6019/PXD054378;

Zamperla MG, Illi B, Barbi V, Cencioni C, Santoni D, Gagliardi S, Garofalo M, Zingale GA, Pandino I, Sbardella D, Cipolla L, Sabbioneda S, Farsetti A, Ripamonti C, Fossati G, Steink, ü, hler C, Gaetano C, Atlante S, HDAC6 inhibition disrupts HDAC6-P300 interaction reshaping the cancer chromatin landscape. Clin Epigenetics, 16(1):109(2024) [pubmed]

Keyword List

submitter keyword: shot-gun, HDAC6,Mass spectrometry

submitter keyword: shot-gun, HDAC6,Mass spectrometry

Contact List

M.D. Ph.D. Diego Sbardella
contact affiliation	IRCCS Fondazione Bietti
contact email	diego.sbardella@fondazionebietti.it
lab head
Diego Sbardella
contact affiliation	IRCCS Fondazione Bietti
contact email	diego.sbardella@fondazionebietti.it
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/10/PXD054378
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/10/PXD054378

PRIDE project URI

Repository Record List

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