PXD053874-1

PXD053874 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic profiling of Pseudosulfitobacter pseudonitzschiae and Cellulophaga lytica in mono- and coculture.
Description	This study was conducted in order to monitor the effect of coculture on the proteomes of both partners (Pseudosulfitobacter pseudonitzschiae and Cellulophaga lytica) and identify which proteins are involved in their asymmetric interactions.
HostingRepository	PRIDE
AnnounceDate	2025-09-08
AnnouncementXML	Submission_2025-09-07_16:25:44.695.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Pseudosulfitobacter pseudonitzschiae; NCBI TaxID: 1402135; scientific name: Cellulophaga lytica; NCBI TaxID: 979;
ModificationList	S-carboxamidoethyl-L-cysteine; acetylated residue; monohydroxylated residue; deamidated residue
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-11 01:30:27	ID requested
⏵ 1	2025-09-07 16:25:45	announced

Publication List

10.1093/ismeco/ycaf118;
Gavriilidou A, Murace M, Portoghese M, Schouten S, Hamidjaja R, Escobar Doncel Á, Boeren S, Giesbers M, Capoulade J, Vignolini S, Smidt H, Ingham CJ, . ISME Commun, 5(1):ycaf118(2025) [pubmed]

10.1093/ismeco/ycaf118;

Gavriilidou A, Murace M, Portoghese M, Schouten S, Hamidjaja R, Escobar Doncel Á, Boeren S, Giesbers M, Capoulade J, Vignolini S, Smidt H, Ingham CJ, . ISME Commun, 5(1):ycaf118(2025) [pubmed]

Keyword List

submitter keyword: Microbial hitchhiking, structural colour, gliding motility, living materials

submitter keyword: Microbial hitchhiking, structural colour, gliding motility, living materials

Contact List

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD053874
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD053874

PRIDE project URI

Repository Record List

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