PXD052899-1
PXD052899 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Comparative brain proteomic analysis between sham and cerebral ischemia experimental groups |
Description | In experimental animal studies, control sham groups are essential to reduce the influence of the surgical intervention on the analysis. The intraluminal filament procedure is one of the most common models of middle cerebral artery occlusion (MCAO) used in the study of brain ischemia. However, in these studies, the sham group has not usually been included in the experimental design. In this study, we aimed to evaluate the relevance of the sham group by analyzing and comparing the brain protein profile between a sham and an MCAO ischemic group. In the sham group, 98 dysregulated proteins were detected compared to the 171 in the ischemic group. Moreover, a comparative study of both protein profiles showed the existence of a pool of 57 proteins that appeared dysregulated in both sham and ischemic animals. These results indicate that the surgical procedure required for intraluminal occlusion of the MCA induces changes in brain protein expression that are not associated with the ischemic lesion. This study highlights the importance of including control sham groups in the experimental design to guarantee that the therapeutic target under study is not affected by the surgical intervention. |
HostingRepository | PRIDE |
AnnounceDate | 2024-08-11 |
AnnouncementXML | Submission_2024-08-10_16:23:48.804.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Susana Bravo |
SpeciesList | scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116; |
ModificationList | No PTMs are included in the dataset |
Instrument | TripleTOF 6600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2024-06-06 09:48:43 | ID requested | |
⏵ 1 | 2024-08-10 16:23:49 | announced |
Publication List
Candamo-Lourido M, Dopico-L, ó, pez A, L, ó, pez-Arias E, L, ó, pez-Amoedo S, Correa-Paz C, Chantada-V, á, zquez MP, Bugallo-Casal A, Del Pozo-Fil, í, u L, P, é, rez-Gayol L, Palomar-Alonso N, Bravo SB, Campos F, P, é, rez-Mato M, Comparative Brain Proteomic Analysis between Sham and Cerebral Ischemia Experimental Groups. Int J Mol Sci, 25(14):(2024) [pubmed] |
10.3390/ijms25147538; |
Keyword List
submitter keyword: Animal models, stroke., sham, proteomic, experimental design |
Contact List
Susana Belén Bravo López | |
---|---|
contact affiliation | Instituto de Investigaciones Sanitarias de Santiago de Compostela |
contact email | sbbravo@gmail.com |
lab head | |
Susana Bravo | |
contact affiliation | FIDIS |
contact email | sbbravo@gmail.com |
dataset submitter |
Full Dataset Link List
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/08/PXD052899 |
PRIDE project URI |
Repository Record List
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