PXD052875-1

PXD052875 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Evaluation of different data-driven rescoring platforms to increase peptide identifications in HeLa digest samples
Description	Evaluate the performance of different rescoring platforms with the aim of standardizing pipelines within our research group.
HostingRepository	PRIDE
AnnounceDate	2025-05-07
AnnouncementXML	Submission_2025-05-06_18:31:37.729.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jesus Castano
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-06-05 16:59:22	ID requested
⏵ 1	2025-05-06 18:31:38	announced

Publication List

10.1002/pmic.202400225;
Casta, ñ, o JD, Beaudry F, Comparative Analysis of Data-Driven Rescoring Platforms for Improved Peptide Identification in HeLa Digest Samples. Proteomics, 25(7):e202400225(2025) [pubmed]

10.1002/pmic.202400225;

Casta, ñ, o JD, Beaudry F, Comparative Analysis of Data-Driven Rescoring Platforms for Improved Peptide Identification in HeLa Digest Samples. Proteomics, 25(7):e202400225(2025) [pubmed]

Keyword List

submitter keyword: HeLa samples, Rescoring pipelines

submitter keyword: HeLa samples, Rescoring pipelines

Contact List

Francis Beaudry
contact affiliation	Department of Veterinary Biomedicine
contact email	francis.beaudry@umontreal.ca
lab head
Jesus Castano
contact affiliation	Postdoctoral Fellow
contact email	jesus.david.castano.uruena@umontreal.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD052875
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD052875

PRIDE project URI

Repository Record List

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