PXD052791-1

PXD052791 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic analysis of neonatal rats distal colon mucus
Description	Compositional analysis of the neonatal rats distal colon mucus proteome by label-free mass spectrometry indicated significant variability in mucus protein composition at different ages.
HostingRepository	PRIDE
AnnounceDate	2025-04-01
AnnouncementXML	Submission_2025-04-01_01:22:09.303.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Liisa Arike
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF; Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-06-03 03:28:34	ID requested
⏵ 1	2025-04-01 01:22:10	announced

Publication List

10.1101/2024.07.03.601781;
Johansson Å, Subramani MV, Yilmaz B, Nystr, ö, m E, Layunta E, Arike L, Sommer F, Rosenstiel P, Vereecke L, Holm LM, Wullaert A, Pelaseyed T, Johansson MEV, Birchenough GMH, Neonatal microbiota colonization drives maturation of primary and secondary goblet cell mediated protection in the pre-weaning colon. bioRxiv, ():(2024) [pubmed]

10.1101/2024.07.03.601781;

Johansson Å, Subramani MV, Yilmaz B, Nystr, ö, m E, Layunta E, Arike L, Sommer F, Rosenstiel P, Vereecke L, Holm LM, Wullaert A, Pelaseyed T, Johansson MEV, Birchenough GMH, Neonatal microbiota colonization drives maturation of primary and secondary goblet cell mediated protection in the pre-weaning colon. bioRxiv, ():(2024) [pubmed]

Keyword List

submitter keyword: mass-spectrometry,LFQ proteomics, rats, mucus, colon

submitter keyword: mass-spectrometry,LFQ proteomics, rats, mucus, colon

Contact List

Liisa Arike
contact affiliation	Proteomics laboratory, Mucin Biology Groups, Department of Medical Biochemistry and Cell Biology, University of Gothenburg, Sweden
contact email	liisaarike@gmail.com
lab head
Liisa Arike
contact affiliation	PhD
contact email	liisaarike@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD052791
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD052791

PRIDE project URI

Repository Record List

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